Cethromycin
for CABP:
Evaluation of Efficacy
Christopher Kadoorie, Ph.D.
Division of Biometrics IV
Office of Biostatistics
Anti-Infective Advisory Committee Meeting
June 2, 2009
2
Brief History of Development
•
Cethromycin
(ABT-773), a second generation ketolide,
originally belonged to Abbott Labs
•
Nov. 27, 2000:
Abbott/FDA meeting to discuss their Phase
III developmental plan for cethromycin
(CABP, AECB,
ABS and T/P)
•
Feb. 9, 2005:
Advanced Life Sciences, Inc. (ALS) licensed
the product from Abbott (CABP only).
•
Dec. 12, 2005:
ALS/FDA meeting, 2 adequate & well-
controlled CABP studies were recommended
•
Dec. 17, 2007:
ALS/FDA meeting, FDA requested NI study
design justification
•
April 7, 2008:
Pre-NDA meeting
3
Outline
•
Studies 05 & 06
•
Sponsor’s NI Margin Assumptions
•
NI Margin Determination
•
FDA Reviewer Sensitivity Analyses
•
Patient Disposition
•
Clinical Cure Rates
•
Patient Distribution/Mortality by Age & PORT Score
•
Statistical Uncertainties
•
Conclusions
4
Studies 05 & 06: Design
•
Both Study-05 and Study-06:
¾ Enrolled patients with mild-to-moderate community-acquired
bacterial pneumonia (CABP)
¾Were active-controlled, double-blind, parallel group, multi-center,
NI studies with identical designs
¾ Randomized patients 1:1 to receive cethromycin (300 mg QD for
7 days) or clarithromycin (250 mg BID for 7 days)
¾Were sized for ~ 500 subjects assuming 10% NI margin, 90% PPc
cure rate, 80% evaluability rate, 90% power at the 2α =0.05 level
•
Primary study design differences related to the geographical
areas of selected study sites
¾ Study 05 conducted in US, Canada & South Africa (62 sites)
¾ Study 06 conducted Latin America, Europe & Israel (72 sites)
5
Studies 05 & 06: Inclusion Criteria
•
Studies 05 & 06 included adult patients with:
¾Recent onset of symptoms, and
¾A chest X-ray consistent with CABP, and
¾At least two of the following signs/symptoms:
•
Cough;
•
Fever ( >38°C or >100.4°F) ,
•
Dyspnea
or tachypnea
(presence or absence)
•
Auscultatory
findings of rales
or evidence of pulmonary
consolidation (dullness on percussion, bronchial breath sounds)
•
Elevated white blood cell count (WBC > 10,000/mm3) or 15%
immature neutrophils
or leukopenia
(WBC < 4,500/mm3)
•
Patients were enrolled if considered suitable for oral
antibiotic therapy
6
Studies 05 & 06: Visits
Visit #1 #2 #3 #4 #5
Visit
Name
Baseline On
Therapy
Post
Therapy
Test of
Cure*
(TOC)
Follow-up
(telephone)
Study
Days
-2 to 1 4 to 6 8 to 11 14 to 22 37 to 40
Timing within 48
hrs. of
first dose
4-6 days
after first
dose
24-72
hrs. after
last dose
7-14
days
after last
dose
30-33 days
after last
dose
* Clinical response to therapy assessed by investigator at the TOC visit
7
Studies 05 & 06: Primary Endpoint
•
Primary efficacy endpoint: Clinical cure rate at TOC visit
•
Clinical cure at the TOC visit:
¾ Improvement/return to pre-infection state or no progression of
pulmonary infiltrates consistent with pneumonia and
¾ Resolution of all baseline signs and symptoms of CAP
•
A clinical failure at the TOC:
¾ Persistence/worsening in signs/symptoms after 3-5 days of therapy or
¾ Requirement for additional antibiotics due to lack of improvement or
¾ Development of new pulmonary infection or extrapulmonary infection
requiring other antimicrobial therapy or
¾ Progression of chest radiological abnormalities or
¾ Death due to pneumonia
•
Indeterminate at TOC: TOC evaluation was not possible
8
Studies 05 & 06: Analysis Populations
•
Intent-to-Treat (ITT) study patients:
¾ Received at least one dose of study medication
¾ Had clinical diagnosis of pneumonia supported by a positive pre-
treatment chest X-ray and at least two appropriate clinical
signs/symptoms
•
Clinical Per Protocol (PPc) patients also:
¾ Took 3 days of study medication (80% to be a clinical cure) and
¾ Had no other systemic antimicrobial agent administered from 1 week
before therapy until TOC (unless failure or indeterminate)
•
Bacteriological Per Protocol (PPb) patients also:
¾ Had at least one qualifying pathogen isolated from baseline culture
or identified via serology or antigen testing
•
mITT
patients (defined in FDA analyses only) consisted of ITT
patients with a qualifying baseline pathogen
9
Sponsor’s NI Margin Assumptions
•
ITT and PPc
were the co-primary analysis populations
•
In each of the ITT and PPc, NI margins were determined by the
higher of the two treatment group cure rates
Higher Cure Rate: NI Margin:
90% ≤
Rate 10%
80% ≤
Rate <
90% 15%
70% ≤
Rate <
80% 20%
• This implied NI margin determination of 15% ITT, 10% PPc
•
The Sponsor’s proposed NI margin based on 1992 “Points to
Consider”
document is no longer considered acceptable by FDA
•
In February 2001, the FDA posted a disclaimer to the above
document stating the sliding-scale for selecting the NI margin was no
longer in use.
10
NI Margin Determination: General Approach
•
“2007 Draft Guidance for Industry: Antibacterial Drug
Products: Use of Non-inferiority Studies to Support
Approval”
recommends an adequately justified NI margin.
•
This margin should be based upon the active control
treatment effect (M1) for an appropriate endpoint, discounted
for statistical uncertainties such as:
¾Issues in data quality, study design and conduct, patient
severity at baseline, variability in study sample sizes
¾Imbalances in prognostic factors
•
A substantial fraction of M1 (e.g. ≥50%) should be preserved
to determine the NI margin (M2) such that any potential loss
in efficacy is clinically acceptable.
1111
M1
15%
(Control Effect)
0 30% 40%-10%-20% 20%
Meta-analysis
50%
Historical
placebo-controlled
studies
Favors Control drug
M2 P
R
E
S
E
R
V
A
T
I
O
N
(Point estimate, 95% CI)
Discount for
uncertainties
5%
NI Margin Determination: Hypothetical Example
12
NI Margin Determination: Historical
Evidence in CABP
•
NI margin for CABP has been previously discussed.
•
No data from placebo-controlled trials in CABP are
available
•
Historical studies and clinical trials of antibacterial
treatment of pneumonia provide evidence that
antibacterial drugs reduced mortality in patients with
pneumococcal or lobar pneumonia.
•
The effect of treatment on survival was consistently
greater in older patients (older than 50 years) and in
patients with bacteremia.
13
FDA Reviewer Sensitivity Analyses
•
To examine patient populations more comparable to historical
populations, Reviewer analyses included study patients meeting the
following criteria:
¾ PORT Scores ≥ 2, and
¾ No Prior antibiotic therapy (just prior to start of treatment) and
¾ No atypical sole pathogens (e.g. L. pneumophila, M. pneumoniae,
C. pneumoniae);
•
Each of these criteria is often critical for assessing the effect due to
treatment in CABP patients
•
A few exceptions were identified by the FDA reviewers:
¾ Two ITT patients with prior antibiotic therapy were not excluded on that
basis (Prior topical Abx unlikely to affect course of CABP infection)
¾ Six ITT patients with atypical pathogens were not excluded on that basis
(evidence of bacterial infection from sputum results)
¾ Only three of these ITT patients were included in FDA analyses.
14
Patient Disposition: Randomized Patients
• Study 05 randomized 584 patients (292 to each study arm)
¾2 patients (1 in each arm) failed to receive study drug
¾67 patients (30 Cethromycin, 37 Clari) had inadequate
radiographic evidence or a confounding disease,
¾515 ITT patients (261 Cethromycin, 254 Clari)
¾231 ITT patients (110 Cethro, 121 Clari) met Reviewer analysis
criteria
• Study 06 randomized 522 patients (261 to each study arm):
¾1 Clari patient failed to receive study drug
¾11 patients (4 Cethro, 7 Clari) had inadequate radiographic
evidence or a confounding disease,
¾ 510 ITT patients (257 to Cethro, 253 to Clari)
¾218 ITT patients (113 Cethro, 105 Clari) met Reviewer analysis
criteria
15
Study 05 (n=515) Study 06 (n=510)
Population
Cethromycin
(n=261)
n (%)
Clari
(n=254)
n (%)
Total
N (%)
Cethromycin
(n=257)
n (%)
Clari
(n=253)
n (%)
Total
N (%)
Sponsor Analysis Criteria Met:
ITT 261 (100) 254 (100) 515 (100) 257 (100) 253 (100) 510 (100)
PPc 218 (84) 208 (82) 426 (83) 224 (87) 221 (87) 445 (87)
mITT 81 (31) 85 (33) 166 (32) 76 (30) 72 (28) 148 (29)
Reviewer Analysis Criteria Met:
ITT 110 (42) 121 (48) 231 (45) 113 (44) 105 (42) 218 (43)
PPc 89 (34) 93 (37) 182 (35) 98 (38) 92 (36) 190 (37)
mITT 33 (13) 34 (13) 67 (13) 21 (8) 22 (9) 43 (8)
Patient Disposition: Key Analysis Populations
16
Clinical Cure Rates: Primary Analysis
Study 05 Study 06
Analysis
Pop.
Cethromycin
n/N (%)
Clari
n/N (%)
Difference
95% CI
Cethromycin
n/N (%)
Clari
n/N (%)
Difference
95% CI
Sponsor Analysis Criteria Met
ITT 217/261 (83.1) 206/254 (81.1) 2.0 (-5.0, 9.0) 213/257 (82.9) 224/253 (88.5) -5.7 (-12.1, 0.8)
PPc 205/218 (94.0) 195/208 (93.8) 0.3 (-4.7, 5.3) 205/224 (91.5) 212/221 (95.9) -4.4 (-9.3, 0.5)
mITT 73/81 (90.1) 72/85 (84.7) 5.4 (-5.8, 16.7) 62/76 (81.6) 63/72 (87.5) -5.9 (-18.9, 7.0)
PPb 70/73 (95.9) 67/69 (97.1) -1.2 (-8.7, 6.2) 57/64 (89.1) 61/63 (96.8) -7.8 (-18.1, 2.6)
Reviewer Analysis Criteria Met
ITT 89/110 (80.9) 95/121 (78.5) 2.4 (-8.8, 13.6) 86/113 (76.1) 90/105 (85.7) -9.6 (-20.9, 1.6)
PPc 84/89 (94.4) 89/93 (95.7) -1.3 (-8.7, 6.1) 85/98 (86.7) 86/92 (93.5) -6.7 (-16.2, 2.7)
mITT 29/33 (87.9) 27/34 (79.4) 8.5 (-10.4, 27.3) 12/21 (57.1) 17/22 (77.3) -20.1 (-47.0, 8.8)
PPb 26/27 (96.3) 24/25 (96.0) 0.3 (-15.1, 17.6) 12/17 (70.6) 17/19 (89.5) -18.9 (-46.4, 8.6)
17
Clinical Cure Rates: by PORT Scores (I ,II vs. III, IV)
Study 05 Study 06
PORT
Scores
Cethromycin
n/N (%)
Clari
n/N (%)
Cethromycin –
Clari
Diff; 95% CI
Cethromycin
n/N (%)
Clari
n/N (%)
Cethromycin –
Clari
Diff, 95% CI
ITT Subjects
I, II 202/237 ( 85.2) 185/227 (81.5) 3.7 (-3.5, 10.9) 191/225 (84.9) 199/223 (89.2) -4.3 ( -11.0, 2.3)
III, IV 15/24 (62.5) 21/27 (77.8) -15.3 (-44.1, 13.6) 22/32 (68.8) 25/30 (83.3) -14.6 (-38.7, 9.5)
PPc Subjects
I, II 190/200 (95.0) 175/186 (94.1) 0.9 (-4.1, 6.0) 183/196 (93.4) 189/197 (95.9) -2.6 (-7.5, 2.4)
III, IV 15/18 (83.3) 20/22 (90.9) -7.6 (-33.9, 15.0) 22/28 (78.6) 23/24 (95.8) -17.3 (-37.2, 2.6)
mITT Subjects
I, II 66/73 (90.4) 69/81 (85.2) 5.2 (-6.3, 16.8) 57/67 (85.1) 58/65 (89.2) -4.2 (-17.1, 8.7)
III, IV 7/8 (87.5) 3/4 (75.0) 12.5 5/9 (55.6) 5/7 (71.4) -15.9
18
Clinical Cure Rates: by Age (< 50 vs. ≥
50)
Study 05 Study 06
Age
Cethromycin
n/N (%)
Clari
n/N (%)
Cethromycin –
Clari
Diff; 95% CI
Cethromycin
n/N (%)
Clari
n/N (%)
Cethromycin –
Clari
Diff, 95% CI
ITT Subjects
< 50 124/149 (83.2) 97/114 (85.1) -1.9 (-11.5,7.8) 120/134 (89.6) 124/136 (91.2) -1.6 (-9.4, 6.2)
≥ 50 93/112 (83.0) 109/140 (77.9) 5.2 (-5.4, 15.8) 93/123 (75.6) 100/117 (85.5) -9.9 (-20.6, 0.9)
PPc Subjects
< 50 117/125 (93.6) 93/100 (93) 0.6 (-6.9, 8.1) 114/119 (95.8) 117/120 (97.5) -1.7 (-7.1, 3.7)
≥ 50 88/93 (94.6) 102/108 (94.4) 0.2 (-7.1, 7.5) 91/105 (86.7) 95/101 (94.1) -7.4 (-16.3, 1.5)
mITT Subjects
< 50 40/45 (88.9) 39/43 (90.7) -1.8 (-6.7,13.1) 45/51 (88.2) 41/44 (93.2) -4.9 (-18.6, 8.7)
≥ 50 33/36 (91.7) 33/42 (78.6) 13.1 (-4.8, 31) 17/25 (68.0) 22/28 (78.6) -10.6 (-38.1,17.0)
19
Clinical Cure Rates by Target Pathogens
Study 05 Study 06 Studies 05 & 06 Clinical Cure
Rates by
Population
Target Pathogen
Cethromycin
n/N (%)
Clari
n/N (%)
Cethromycin
n/N (%)
Clari
n/N (%)
Cethromycin
n/N (%)
Clari
n/N (%)
Sponsor Analysis Criteria Met
mITT
H.influenzae 33/36 (92) 23/26 (88) 24/33 (73) 21/22 (95) 57/69 (83) 44/48 (92)
S .pneumoniae 10/12 (83) 17/22 (77) 15/19 (79) 7/11 (64) 25/31 (81) 24/33 (73)
M.catarrhalis 3/3 (100) 6/6 (100) 2/4 (50) 3/4 (75) 5/7 (71) 9/10 (90)
S.aureus 10/14 (71) 13/14 (93) 7/8 (88) 9/11 (82) 17/22 (77) 22/25 (88)
PPb
H.influenzae 33/35 (94) 20/20 (100) 23/27 (85) 21/22 (95) 56/62 (90) 41/42 (98)
S.pneumoniae 9/9 (100) 15/18 (83) 15/17 (88) 7/9 (78) 24/26 (92) 22/27 (81)
M.catarrhalis 2/2 (100) 6/6 (100) 2/3 (67) 3/4 (75) 4/5 (80) 9/10 (90)
S.aureus 9/10 (90) 13/13 (100) 6/7 (86) 9/9 (100) 15/17 (88) 22/22 (100)
Reviewer Analysis Criteria Met
mITT
H influenzae 14/16 (88) 14/16 (88) 7/13 (54) 12/13 (93) 21/29 (72) 26/29 (90)
S.pneumoniae 8/9 (89) 11/14 (79) 6/9 (67) 4/8 (50) 14/18 (78) 15/22 (68)
M.catarrhalis 3/3 (100) 5/5 (100) 1/3 (33) 3/4 (75) 4/6 (67) 8/9 (89)
S.aureus 4/5 (80) 6/7 (86) 1/2 (50) 1/2 (50) 5/7 (71) 7/9 (78)
PPb
H influenzae 14/15 (93) 11/11 (100) 7/11 (64) 12/13 (93) 21/26 (81) 24/25 (96)
S pneumoniae 7/7 (100) 10/11 (91) 6/7 (86) 4/6 (67) 13/14 (92) 14/17 (82)
M.catarrhalis 2/2 (100) 5/5 (100) 1/2 (50) 3/4 (75) 3/4 (75) 8/9 (89)
S.aureus 3/3 (100) 6/6 (100) 1/2 (50) 1/1 (100) 4/5 (80) 7/7 (100)
20
PORT
Scores
Study 05 Study 06
Cethromycin
(n=261)
Clarithromycin
(n=254)
Cethromycin
(n=257)
Clarithromycin
(n=253)
< 50
n=147
≥
50
n=114
< 50
n=114
≥
50
n=140
< 50
n=134
≥
50
n=123
< 50
n=136
≥
50
n=117
I 136 (93) - 110 (96) - 125 (93) 1 132 (97) -
II 11 (8) 90 (79) 3 (3) 114 (81) 9 (7) 90 (73) 4(3) 87 (74)
III - 16 (14) 1 (1) 23 (16) - 23 (19) - 24 (21)
IV - 8 (7) - 3(2) - 9 (7) - 6 (5)
V - - - - - - - -
Patient Distribution: by Age & PORT Score (ITT)
21
Mortality: by Age & PORT Score
PORT
Scores
Studies 05 & 06 (Safety) N=1103
Cethromycin
(n=552)
Clarithromycin
(n=551)
< 50
n=427
≥
50
n=125
< 50
n=428
≥
50
n=123
I 0/277 - 0/258 -
II 0/125 2/93 (2.2%)
(deaths 2 and14 days
after last dose)
0/138 3/91, (3.3%)
(2, 3 & 53 days
after last dose)
III 0/17 0/23 0/27 1/25 (4.0%)
(15 days after
last dose)
IV 0/8 0/9 0/5 0/7
V
- - - -
Patients with deaths 14, 53 & 15 days after last dose were not included in the ITT population (Safety only).
Three Study 05 patients included who met ITT requirements but were excluded from Safety population
22
Statistical Uncertainties: Active Control Effect
•
Evidence based on the current data may not provide a similar
active control effect compared to historical data.
•
Study 05 & 06 populations differed substantially from
historical ones in patient disease severity. In historical
populations
¾ Baseline mortality risk was higher
¾ Observed mortality rates were higher
•
Study 05 & 06 disease etiologies differed from historical ones
¾ Study subjects most commonly infected with H. influezae
¾ Historical study subjects most commonly infected with S. pneumoniae
•
Study 05 & 06 evaluated clinical response whereas historical
evidence was based on mortality.
Statistical Uncertainties: More Concerns
•
Study 05 & Study 06 did not provide consistent estimates of treatment
differences (Study 06 results less favorable)
•
Study 05 & 06 PORT III/IV patients comprised only 10% &13% of ITT
¾ Analyses in these subjects were limited
¾ Influence of these patients on overall results were limited
•
Study 05 & Study 06 treatment differences sensitive to PORT class
consideration (higher PORT scores tended to favor clarithromycin)
•
Studies 05 & 06 results could be influenced by attenuation of treatment effect
due to lessening disease severity. Since this factor is difficult to quantify or
adjust for, appropriate NI margins may be unclear.
•
Studies 05 & 06 had limited clinical/micro data for a CABP indication:
¾ 45% & 43% of ITT patients included in reviewer ITT analysis
¾ 13% & 8% of ITT patients included in reviewer mITT analysis
¾ Only 9 cethromycin patients in each study with S.pneumoniae in reviewer analysis
Conclusions
•
Overall evidence suggests that Study 05 & 06 patients may have lower
disease severity compared to historical study patients
¾ Baseline mortality risk was lower than in historical trials
¾ Observed mortality rates were lower than in historical trials
•
Thus the active control effect & NI margin may be unclear
¾ Lack of comparability with historical studies
¾ Potential attenuation of active control effect from lower disease severity
¾ Difficulty quantifying or adjusting for attenuation in the treatment effect
•
Although Reviewer analyses could examine subgroups at higher risk,
clinical and especially micro data were limited
•
Treatment differences were also inconsistent across PORT classes
¾ For PORT III & IV patients, differences in Cure rates favored Clarithromycin
by ~ 15% in each study
¾ For PORT I & II patients, differences were smaller but may be unclear due to
potential attenuation from lack of disease severity.
Acknowledgements
•
Thamban Valappil, Ph.D.
•
John Alexander, M.D., M.P.H
Integrated Analyses by PORT Score (All Other Reviewer
Analysis Criteria Met)
Study CL05 & CL06 (Combined)
PORT
Score
Cethromycin
n/N (%)
Clarithromycin
n/N (%)
Treatment
Difference:
Cethromycin –
Clarithromycin
(95% CI)
Cethromycin
n/N (%)
Clarithromycin
n/N (%)
Treatment
Difference:
Cethromycin –
Clarithromycin
(95% CI)
ITT (N=833) mITT (N=203)
= 1 173/201 (86.1) 162/183 (88.5) -2.5 (-9.6, 4.7) 44/51 (86.3) 38/42 (90.5)
-4.2
(-19.3, 10.9)
= 2 143/173 (82.7) 146/177 (82.5) 0.2 (-8.3, 8.7) 31/39(79.5) 36/45 (80.0)
-0.5
(-20.1,19.1)
= 3 23/34 (67.6) 33/41 (80.5) -12.8 (-35.4, 9.7) 8/11 (72.7) 8/10 (80.0)
-7.3
(-45.1, 32.5)
= 4 9/16 (56.3) 6/8 (75.0) -18.8 -
2/4 (50.0)
0/1 (0.0)
-50.0
-
≥ 1 348/424 (82.1) 347/409 (84.8) -2.8 (-8.0, 2.5) 85/105 (81.0) 82/98 (83.7)
-2.7
(-14.2, 8.8)
≥ 2 175/223 (78.5) 185/226 (81.9) -3.4 (-11.2, 4.4) 41/54 (75.9) 44/56 (78.6)
-2.6
(-20.1, 14.8)
≥ 3 32/50 (64.0) 39/49 (79.6) -15.6 (-35.1, 3.9) 10/15 (66.7) 8/11 (72.7)
-6.1
(-41.9, 32.3)
PPc (N=705) PPb (N=171)
= 1 164/172 (95.3) 154/161 (957) -0.3 (-5.4, 4.8) 43/45 (95.6) 37/38 (97.4)
-1.8
(-12.1, 8.5)
= 2 137/146 (93.8) 138/146 (94.5) -0.7 (-6.7, 5.4) 28/30 (93.3) 33/36 (91.7)
1.7
(-14.4, 16.9)
= 3 23/28 (82.1) 32/33 (97.0) -14.8 (-34.1, 0.9) 8/11 (72.7) 8/8 (100) -27.3
= 4 9/13 (69.2) 5/6 (83.3) -14.1 - 2/3 (66.7) 0/0 (- )
-
-
≥ 1 333/359 (92.8) 329/346 (95.1) -2.3 (-6.1, 1.5) 81/89 (91.0) 78/82 (95.1)
-4.1
(-12.8, 4.6)
≥ 2 169/187 (90.4) 175/185 (94.6) -4.2 (-10.1, 1.7) 38/44 (86.4) 41/44 (93.2)
-6.8
(-21.7, 6.9)
≥ 3 32/41 (78.0) 37/39 (94.9) -16.8 (-33.0, -1.7) 10/14 (71.4) 8/8 (100)
-28.6
-
�Cethromycin for CABP:�Evaluation of Efficacy�
Brief History of Development
Outline �
Studies 05 & 06: Design
Studies 05 & 06: Inclusion Criteria
Studies 05 & 06: Visits
Studies 05 & 06: Primary Endpoint
Studies 05 & 06: Analysis Populations
Sponsor’s NI Margin Assumptions
NI Margin Determination: General Approach
Slide Number 11
NI Margin Determination: Historical Evidence in CABP
FDA Reviewer Sensitivity Analyses �
Patient Disposition: Randomized Patients
Patient Disposition: Key Analysis Populations
Clinical Cure Rates: Primary Analysis
Clinical Cure Rates: by PORT Scores (I ,II vs. III, IV)
Clinical Cure Rates: by Age (< 50 vs. ≥ 50)
Clinical Cure Rates by Target Pathogens
Patient Distribution: by Age & PORT Score (ITT)
Mortality: by Age & PORT Score
Statistical Uncertainties: Active Control Effect
Statistical Uncertainties: More Concerns
Conclusions
Acknowledgements
Integrated Analyses by PORT Score (All Other Reviewer Analys